Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841448.1_cds_XP_016507980.1_21050
CDS Infomation

[gene=LOC107825615] [db_xref=GeneID:107825615] [protein=probable serine/threonine-protein kinase At1g09600 isoform X2] [protein_id=XP_016507980.1] [location=complement(join(20759..20926,21400..21681,21766..21865,22505..22605,23136..23363,23604..23921,24061..24345,25084..25539))] [gbkey=CDS]
Sequence

ATGGGCGGGTGTTGCTCAAAGGGTTCTTCCGAAGATGATTATGTTATCGAACATGAGGAG
AAAGAAAAAGAAGTTGATAAATATTCTGTACAGATGGTTGCTCCCTTACAAAGAGAGGAG
ATTAAAGTAGACTTAGTTAATCCTAAGATTGAACTACCTATGAAATCTAAATCAAAGCGG
ACGTCAGAAGCCAGTGTTGTTCCTGTCCCTGCAACAAAAGTTGAGGATGATGGAAAAACA
AGAATTATCGAGAGGCCTAAGGAAGGACATCACAAGAGGCGGTCCACCGTGGATTTTGGA
GTGCAACAATCGTTGTCTAGAATTGTAAGCATATCTAATGGTGTAAAGGGTGAACTCGGA
GCTGCAGGATGGCCATCGTGGCTTAGTTCTGTTGCAGCCGAGGCCATTCAAGGGTGGGTT
CCTCGAAGTGCAGAGTCATTTGAAAAATTAAACAAAATAGGTCAAGGGACATATAGTAGT
GTTTACAAGGCCCGTGACCTTAAAACCAATAAAATTGTTGCAATGAAGAAAGTGAGATTT
GTGAATATGGACCCAGAGAGCGTTCGCTTTATGGCAAGGGAGATAAGTATTTTGCGTAGA
TTGGACCACCCAAATGTTATGAAACTTGAGGCTTTGGTCACATCTAGGATATCAGGCAGC
TTATATCTTGTATTTGAATACATGGAGCATGATCTTGCTGGTCTTGCAGCAGCACCTCGG
GTTAAGTTTACTGAAGCACAGATTAAATGTTATATGCAACAATTGCTTCGTGGACTTGAG
CATTGTCATAGTAGGGCTGTACTTCATCGAGACATTAAGGGTTCAAATCTTCTCATTGAT
GATAACGGTGTTTTAAGGATTGGAGACTTTGGTTTGGCTACAACCTTTGAGCCCAACCAA
ACACAGCCATTAACCAGTCGTGTTGTAACTCTATGGTATAGAGCTCCTGAGCTTTTGCTT
GGTGCAACAGAATATGGAGTGGCCATAGATATGTGGAGTGCTGGCTGCATCCTCGCCGAA
TTATTTGCTGGAAAGCCTATTATGCCGGGAAGAACAGAGGTGGAGCAAATGCATAAGATT
TTCAAACTTTGTGGTTCACCTTCTCAAGAATACTGGAAGAAATCAAAACTACCTCATGCT
ACTAGTTTTAAGCCACAACACCCATACAAGAGATGCGTAACTGATACATACAAGGACTTT
CCTCCTTCAGCTTTGGCCCTTGTTGATGTCCTACTTTCAATAGAACCAGAAAAGCGTGGT
ACTGCTTATTCTGCGCTCAATAGTGAGTTCTTCAATACAAAGCCCTTACCTTGTGATCCT
TCTAGCTTACCAAAATATCCTCCAAGCAAGGAATATGACGCGAAGATTCGAGAGGAGGAA
GCAAGAAGGCGAAAAGCTGAAAGTGTGAAAGGATGTGGAGATGATTCATTGGGAAAGTCC
ACATGGCAATCAAAGGGAGAAAGTACTACAGAATCCAATGCCGGGCAGTCAAATATAAGC
AAAAGTGTGAAATATAATCCTCTGGAAGAAAGTGGAACTGGATTCCCTATTGAGCCGCCA
AGAGTGAAAAATAGGAACGGATTCACTCATTCTACTTCAGTGGTCCATCCTACTGCAGCT
GCCTATGCTCACAAAGTCAAAGAGGATTCATGTGTGTCCCGACATGGTGGAGAGCTTCGA
AGGCAGGGTTCGCACAAGTCTCGAGCTGTAGGAGAATTTTCTAGTGTCCATTCAAAGAGG
GATGACGGGTCATCTTATGGGGATTCAACAGTTTATGTGCCAAAGAAAAGTAGAATCCTT
TGCTCTGGACCACTAGTGCCACCAGGGGGAAGTATGGAAGACATGTTAAAGGAACACGAG
AGACAAATTCAAGAAGCAGTTCGAAAAGCACGTCTAGAAAAGGGAAGGACCAAAAAGAAC
TGTTATGATTATGACTAG

Peptide Sequence

PEP ID

XP_016507980.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g09600 isoform X2 [Nicotiana tabacum]
Sequence

MGGCCSKGSSEDDYVIEHEEKEKEVDKYSVQMVAPLQREEIKVDLVNPKIELPMKSKSKR
TSEASVVPVPATKVEDDGKTRIIERPKEGHHKRRSTVDFGVQQSLSRIVSISNGVKGELG
AAGWPSWLSSVAAEAIQGWVPRSAESFEKLNKIGQGTYSSVYKARDLKTNKIVAMKKVRF
VNMDPESVRFMAREISILRRLDHPNVMKLEALVTSRISGSLYLVFEYMEHDLAGLAAAPR
VKFTEAQIKCYMQQLLRGLEHCHSRAVLHRDIKGSNLLIDDNGVLRIGDFGLATTFEPNQ
TQPLTSRVVTLWYRAPELLLGATEYGVAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKI
FKLCGSPSQEYWKKSKLPHATSFKPQHPYKRCVTDTYKDFPPSALALVDVLLSIEPEKRG
TAYSALNSEFFNTKPLPCDPSSLPKYPPSKEYDAKIREEEARRRKAESVKGCGDDSLGKS
TWQSKGESTTESNAGQSNISKSVKYNPLEESGTGFPIEPPRVKNRNGFTHSTSVVHPTAA
AYAHKVKEDSCVSRHGGELRRQGSHKSRAVGEFSSVHSKRDDGSSYGDSTVYVPKKSRIL
CSGPLVPPGGSMEDMLKEHERQIQEAVRKARLEKGRTKKNCYDYD

Transcript Sequence

Gene sequence data has not been registered.